Other Modeling

A great joy of working in applied and computational mathematics is that one has tools, can travel.

Fecal IgA, antigen absorption, and gut microbiome composition are associated with food antigen sen- sitization in genetically susceptible mice, J. M. Smeekens, B. T. Johnson-Weaver, A. L. Hinton, M. A. Azcarate-Peril, T. P. Moran, R. M. Immormino, J. R. Kesselring, E. C. Steinbach, K. A. Orgel, H. F. Staats, A. W. Burks, P. J. Mucha, M. T. Ferris and M. D. Kulis, Frontiers in Immunology 11, 3421 (2021).
Positive psychological states and stress responses in caregivers of adults receiving an allogeneic bone marrow transplant: A study protocol, K. R. Tan, S. J. Santacroce, W. A. Wood, D. K. Mayer, H. Santos, P. J. Mucha, T. A. Schwartz and B. L. Fredrickson,
Journal of Advanced Nursing [doi: 10.1111/jan.14742] (2021).
MigrationABM.png Climate shocks and migration: an agent-based modeling approach,
B. Entwisle, N. E. Williams, A. M. Verdery, R. R. Rindfuss, S. J. Walsh, G. P. Malanson, P. J. Mucha, B. G. Frizzelle, P. M. McDaniel, X. Yao, B. W. Heumann, P. Prasartkul, Y. Sawangdee and A. Jampaklay, Population and Environment 38, 47–71 (2016).
Spatiotemporal patterns and trends of Indian monsoonal rainfall extremes, N. Malik, B. Bookhagen and P. J. Mucha,
Geophysical Research Letters 43, 1710–1717 (2016).
HIVbinding.png Modeling of virion collisions in cervicovaginal mucus reveals limits on agglutination as the protective mechanism of secretory immunoglobulin A, S. A. McKinley, A. Chen, F. Shi, S. Wang, P. J. Mucha, M. G. Forest and S. K. Lai, PLoS ONE 10, e0131351 (2015).
neutralization.png Modeling neutralization kinetics of HIV by broadly neutralizing monoclonal antibodies in genital secretions coating the cervicovaginal mucosa, S. A. McKinley, A. Chen, F. Shi, S. Wang, P. J. Mucha, M. G. Forest and S. K. Lai, PLoS ONE 9, e100598 (2014).
FLUS Fluctuation of similarity (FLUS) to detect transitions between distinct dynamical regimes in short time series, N. Malik, N. Marwan, Y. Zou,
P. J. Mucha and J. Kurths, Physical Review E 89, 062908 (2014).
molecularshield.png Transient antibody-mucin interactions produce a dynamic molecular shield against viral invasion, A. Chen, S. A. McKinley, S. Wang, F. Shi, P. J. Mucha, M. G. Forest and S. K. Lai, Biophysical Journal 106, 2028–2036 (2014).
temp Design of an agent-based model to examine population-environment interactions in Nang Rong District, Thailand,
S. J. Walsh, G. P. Malanson, B. Entwisle, R. R. Rindfuss, P. J. Mucha, B. W. Heumann, P. M. McDaniel, B. G. Frizzelle, A. Verdery, N. Williams, Y. Xiaozheng and D. Ding, Applied Geography 39, 183–198 (2013).
Spectroscopic study of electrons emitted in Arq+ (8<=q<=16) on Ar at 2.3q keV collision energy, J. Vancura, P. J. Mucha and V. O. Kostroun, Physical Review A 53, 2379–2390 (1996).
Finite Deformation of an Elastic Membrane: A Model for Epiretinal Membrane Separation, P. J. Mucha, M. Phil. Thesis, Department of Physics, University of Cambridge (1994).